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35k axiom array snp genotyping data  (Thermo Fisher)


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    Thermo Fisher 35k axiom array snp genotyping data
    35k Axiom Array Snp Genotyping Data, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/genotype+snp+array+data/10__1016_slash_j__pmpp__2024__102467-168-6-5
    Average 90 stars, based on 1 article reviews
    35k axiom array snp genotyping data - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Genome Wide:

    Article Title: Identification of Novel COPD Susceptibility Genes: A Genome-wide Interaction Study
    Article Snippet: .. Genotype data were obtained using the Affymetrix genome-wide human SNP array 5.0 [15] and QC analyses were performed for participants who underwent spirometry analysis, and their smoking history was recorded. ..

    Microarray:

    Article Title: Enhanced Risk Prediction for Coronary Heart Disease by Leveraging Polygenic Risk Score and Clinical Risk Score in European Hypertensive Adults
    Article Snippet: .. SNP genotype data of all participants were acquired from the Affymetrix 6.0 DNA microarray platform (Affymetrix, Santa Clara, CA, USA) and analyzed using the Birdseed variant-calling algorithm. ..

    Article Title: Enhanced Risk Prediction for Coronary Heart Disease by Leveraging Polygenic Risk Score and Clinical Risk Score in European Hypertensive Adults.
    Article Snippet: .. SNP genotype data of all participants were acquired from the Affymetrix 6.0 DNA microarray platform (Affymetrix, Santa Clara, CA, USA) and analyzed using the Birdseed variant-calling algorithm. ..

    Variant Assay:

    Article Title: Enhanced Risk Prediction for Coronary Heart Disease by Leveraging Polygenic Risk Score and Clinical Risk Score in European Hypertensive Adults
    Article Snippet: .. SNP genotype data of all participants were acquired from the Affymetrix 6.0 DNA microarray platform (Affymetrix, Santa Clara, CA, USA) and analyzed using the Birdseed variant-calling algorithm. ..

    Article Title: Enhanced Risk Prediction for Coronary Heart Disease by Leveraging Polygenic Risk Score and Clinical Risk Score in European Hypertensive Adults.
    Article Snippet: .. SNP genotype data of all participants were acquired from the Affymetrix 6.0 DNA microarray platform (Affymetrix, Santa Clara, CA, USA) and analyzed using the Birdseed variant-calling algorithm. ..

    other:

    Article Title: SNRPD1 conveys prognostic value on breast cancer survival and is required for anthracycline sensitivity.
    Article Snippet: The TCGA genotype data on 906600 SNPs was produced using the Affymetrix Genome Wide Human SNP array 6.0.

    Article Title: Comprehensive whole-genome analyses of the UK Biobank reveal significant sex differences in both genotype missingness and allele frequency on the X chromosome
    Article Snippet: Thirdly, Ryu [ ] used Affymetrix Genome-Wide Human SNP Array 5.0 genotype data with imputation to HapMap 3 data from ~9 k Koreans for autosomal SNPs, and identified 9 loci with genome-wide significant sdMAF.

    Article Title: eaQTLdb: An atlas of enhancer activity quantitative trait loci across cancer types.
    Article Snippet: Department of Geriatrics, Tianjin Medical University General Hospital, The Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, Center for Reproductive Medicine of Tianjin Medical University Second Hospital, School of Basic Medical Sciences, Tianjin Medical University, Tianjin, China State Key Laboratory of Experimental Hematology, National Clinical Research Center for Blood Diseases, Haihe Laboratory of Cell Ecosystem, Institute of Hematology & Blood Diseases Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Tianjin, China Department of Bioinformatics, School of Basic Medical Sciences, Tianjin Medical University, Tianjin, China Department of Geriatrics, Tianjin Geriatrics Institute, Tianjin Medical University General Hospital, Tianjin, China

    Article Title: Novel 2 Gene Signatures Associated With Breast Cancer Proliferation: Insights From Predictive Differential Gene Expression Analysis.
    Article Snippet: The use of proliferation markers provides valuable information about the rate of tumor growth, which can guide treatment decisions.. However, there is still a lack of consensus regarding the optimal molecular markers or tests to use in clinical practice.. Integrating gene expression data with clinical and histopathologic parameters enhances our understanding of disease processes, facilitates the identification of precise prognostic predictors, and supports the development of effective therapeutic strategies.

    Article Title: Long-term longitudinal analysis of 4,187 participants reveals insights into determinants of clonal hematopoiesis
    Article Snippet: From dbGaP, we downloaded genotype data (Affymetrix 6.0 SNP array) imputed to the whole-genome sequence using the 1000 Genomes reference panel ( www.1000genomes.org , June 2011 release) using IMPUTE2 software (details in dbGaP phs000090/phg000248/).



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    Image Search Results


    MMN ranks higher than working memory and ventricular volume in comparison of endophenotype ranking values (ERV SNP ) of schizophrenia candidate endophenotypes The graph shows a comparison of SNP-based endophenotype ranking values (ERV SNP ) of MMN compared to ERV SNP s of Rey Auditory Verbal Learning Task (RAVLT) immediate recall, RAVLT delayed recall, and brain lateral ventricular volume (LVV). The color scale indicates the ERV strength: a good endophenotype would sit in darker red or darker blue areas, indicating that it has a high degree of pleiotropy with the disease and is strongly heritable itself. ERV here has a maximum value of 0.447, given a SNP-based heritability ( h 2 SNP ) for schizophrenia of 0.2002 ( <xref ref-type=Pardiñas et al., 2018 ). The shaded confidence areas in gray indicate the SEs of the endophenotype heritability estimates ( h 2 SNP ) along the x axis and of the genetic overlap between the endophenotype and schizophrenia along the y axis. The ERV is a standardized genetic covariance and does not have units. " width="100%" height="100%">

    Journal: Cell Reports

    Article Title: Transcriptome-wide association study reveals two genes that influence mismatch negativity

    doi: 10.1016/j.celrep.2021.108868

    Figure Lengend Snippet: MMN ranks higher than working memory and ventricular volume in comparison of endophenotype ranking values (ERV SNP ) of schizophrenia candidate endophenotypes The graph shows a comparison of SNP-based endophenotype ranking values (ERV SNP ) of MMN compared to ERV SNP s of Rey Auditory Verbal Learning Task (RAVLT) immediate recall, RAVLT delayed recall, and brain lateral ventricular volume (LVV). The color scale indicates the ERV strength: a good endophenotype would sit in darker red or darker blue areas, indicating that it has a high degree of pleiotropy with the disease and is strongly heritable itself. ERV here has a maximum value of 0.447, given a SNP-based heritability ( h 2 SNP ) for schizophrenia of 0.2002 ( Pardiñas et al., 2018 ). The shaded confidence areas in gray indicate the SEs of the endophenotype heritability estimates ( h 2 SNP ) along the x axis and of the genetic overlap between the endophenotype and schizophrenia along the y axis. The ERV is a standardized genetic covariance and does not have units.

    Article Snippet: Genome-wide Human SNP Array genotype data (Affymetrix 6.0) , European Bioinformatics Institute, Psychosis Endophenotypes International Consortium , https://www.ebi.ac.uk/ega/dacs/EGAC00001000205.

    Techniques:

    Journal: Cell Reports

    Article Title: Transcriptome-wide association study reveals two genes that influence mismatch negativity

    doi: 10.1016/j.celrep.2021.108868

    Figure Lengend Snippet:

    Article Snippet: Genome-wide Human SNP Array genotype data (Affymetrix 6.0) , European Bioinformatics Institute, Psychosis Endophenotypes International Consortium , https://www.ebi.ac.uk/ega/dacs/EGAC00001000205.

    Techniques: Expressing, Genome Wide, Software, Generated